Output format

tags: Resimpy

1. fastq.gz

Simulated reads are stored in fastq.gz format. Please see here for details.

2. UMI, Barcode, genomic sequence records

The ground-truth or initial generated UMIs, Barcodes, genomic sequences are stored in txt format, respectively.

umi.txt | UMI| | ———— | | AATTTTCCT… | | CTCATCCTC… | | … |

barcode.txt | | | ———— | | TGTGCCCGG… | | TCATCCCTC… | | … |

seq.txt | seq| | ———— | | ATCCTCCTC… | | GCAATCCGA… | | … |