resimpy.sequencing package

Submodules

resimpy.sequencing.Calling module

class resimpy.sequencing.Calling.calling(seq_params)[source]

Bases: object

flow(params)[source]

np()[source]

resimpy.sequencing.CallingTransloc module

class resimpy.sequencing.CallingTransloc.callingTransloc(seq_params)[source]

Bases: object

flow(params)[source]

np()[source]

resimpy.sequencing.Error module

class resimpy.sequencing.Error.error(method)[source]

Bases: object

epos(err_lin_ids, t)[source]

postable(res2p, kind='index_by_same_len')[source]

postableIndexBySameLen(seq_len, num_seq)[source]

postableLambda(x, ids, pos_ids)[source]

tactic1(arr_2d)[source]

todict(bases, reverse=False)[source]

resimpy.sequencing.ErrorTransloc module

class resimpy.sequencing.ErrorTransloc.errorTransloc(method)[source]

Bases: object

epos(err_lin_ids, t)[source]

postable(res2p, kind='index_by_same_len')[source]

postableIndexBySameLen(seq_len, num_seq)[source]

postableLambda(x, ids, pos_ids)[source]

tactic1(arr_2d)[source]

todict(bases, reverse=False)[source]

Module contents